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java.lang.Objectorg.xml.sax.helpers.DefaultHandler
org.systemsbiology.jrap.SAX2ScanHandler
public final class SAX2ScanHandler
Field Summary | |
---|---|
protected boolean |
inPeak
Flag to indicate we are reading a peak tag |
protected boolean |
inPrecursorMZ
Flag to indicate if we are reading the precursor MZ value |
protected java.lang.StringBuffer |
peakData
A string to hold the Base64 peak data |
protected java.lang.StringBuffer |
precursorBuffer
Buffer to hold characters while getting precursorMZ value |
protected Scan |
tmpScan
A new Scan Object |
Constructor Summary | |
---|---|
SAX2ScanHandler()
|
Method Summary | |
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void |
characters(char[] ch,
int start,
int length)
Characters. |
void |
endElement(java.lang.String uri,
java.lang.String local,
java.lang.String raw)
|
void |
error(org.xml.sax.SAXParseException ex)
Error. |
void |
fatalError(org.xml.sax.SAXParseException ex)
Fatal error. |
Scan |
getScan()
|
void |
ignorableWhitespace(char[] ch,
int start,
int length)
Ignorable whitespace. |
protected void |
printError(java.lang.String type,
org.xml.sax.SAXParseException ex)
Prints the error message. |
void |
processingInstruction(java.lang.String target,
java.lang.String data)
Processing instruction. |
void |
startDocument()
Start document. |
void |
startElement(java.lang.String uri,
java.lang.String local,
java.lang.String raw,
org.xml.sax.Attributes attrs)
Start element. |
void |
warning(org.xml.sax.SAXParseException ex)
Warning. |
Methods inherited from class org.xml.sax.helpers.DefaultHandler |
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endDocument, endPrefixMapping, notationDecl, resolveEntity, setDocumentLocator, skippedEntity, startPrefixMapping, unparsedEntityDecl |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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protected Scan tmpScan
protected java.lang.StringBuffer peakData
protected boolean inPeak
protected java.lang.StringBuffer precursorBuffer
protected boolean inPrecursorMZ
Constructor Detail |
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public SAX2ScanHandler()
Method Detail |
---|
public Scan getScan()
public void startDocument() throws org.xml.sax.SAXException
startDocument
in interface org.xml.sax.ContentHandler
startDocument
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void startElement(java.lang.String uri, java.lang.String local, java.lang.String raw, org.xml.sax.Attributes attrs) throws org.xml.sax.SAXException
startElement
in interface org.xml.sax.ContentHandler
startElement
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void endElement(java.lang.String uri, java.lang.String local, java.lang.String raw) throws org.xml.sax.SAXException
endElement
in interface org.xml.sax.ContentHandler
endElement
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void characters(char[] ch, int start, int length) throws org.xml.sax.SAXException
characters
in interface org.xml.sax.ContentHandler
characters
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void ignorableWhitespace(char[] ch, int start, int length) throws org.xml.sax.SAXException
ignorableWhitespace
in interface org.xml.sax.ContentHandler
ignorableWhitespace
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void processingInstruction(java.lang.String target, java.lang.String data) throws org.xml.sax.SAXException
processingInstruction
in interface org.xml.sax.ContentHandler
processingInstruction
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void warning(org.xml.sax.SAXParseException ex) throws org.xml.sax.SAXException
warning
in interface org.xml.sax.ErrorHandler
warning
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void error(org.xml.sax.SAXParseException ex) throws org.xml.sax.SAXException
error
in interface org.xml.sax.ErrorHandler
error
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
public void fatalError(org.xml.sax.SAXParseException ex) throws org.xml.sax.SAXException
fatalError
in interface org.xml.sax.ErrorHandler
fatalError
in class org.xml.sax.helpers.DefaultHandler
org.xml.sax.SAXException
protected void printError(java.lang.String type, org.xml.sax.SAXParseException ex)
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